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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs72983909 chr3:127673638 G/A 0 490 16.37 14.82 6.03 KM Plot
THCA rs72983925 chr3:127683923 T/C 0 487 16.37 14.93 6.03 KM Plot
THCA rs729873 chr8:8315816 G/A 9.86E-11 469 15.93 14.93 12.97 KM Plot
THCA rs72990748 chr2:240211031 C/T 0.000192 475 15.17 16.68 14.18 KM Plot
THCA rs72999942 chr2:241518998 A/G 1.77E-11 485 15.9 15 19.27 KM Plot
THCA rs72999959 chr2:241525022 G/A 2.17E-11 483 15.9 15.42 19.27 KM Plot
THCA rs73001804 chr2:241535036 C/T 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs73001880 chr2:241539071 T/C 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs73003705 chr2:241541129 A/T 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs73003707 chr2:241541150 G/C 2.16E-11 484 15.9 15.42 19.27 KM Plot
THCA rs73003723 chr2:241543594 G/A 2.23E-11 483 15.9 15.42 19.27 KM Plot
THCA rs7302579 chr12:109498680 A/T 2.1E-7 475 15.97 16.87 6.17 KM Plot
THCA rs73034263 chr11:133808038 C/G 6.78E-5 474 16.3 15.23 17.83 KM Plot
THCA rs73034295 chr11:133822133 G/A 8.0E-5 466 16.07 15.62 20.73 KM Plot
THCA rs73036062 chr11:133828187 G/A 3.21E-8 479 16.2 15.62 17.83 KM Plot